Focus on translational research from arabidopsis to crop plants and beyond

Autores
Roeder, Adrienne H.K.; Argueso, Cristiana T.; Williams, Mary; Auge, Gabriela; Li, Xin; Strader, Lucia; Uauy, Cristobal; Wu, Shuang
Año de publicación
2025
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Over the past 4 decades, substantial research efforts in plant science worldwide have focused on the model system Arabidopsis thaliana (Provart et al. 2015). Many of us have dedicated years to the study of Arabidopsis, motivated by the notion that our findings will yield advancements in agriculture and natural ecosystems. Considering translation holistically as the gene functions, pathways, and technologies discovered and developed in Arabidopsis that inform our understanding of other plants, Arabidopsis has had a powerful influence. In particular, the annotation of plant genomes heavily relies on the gene functions elucidated in Arabidopsis (Whitt et al. 2020; Wimalanathan and Lawrence-Dill 2021; Fattel et al. 2022). Many technologies and techniques pioneered in Arabidopsis have been successfully translated to crops and other plant species (Yaschenko et al. 2025). Remarkably, discoveries in Arabidopsis and other plants have also contributed significantly to biomedical research (Jones et al. 2008; Strader et al. 2025). For example, the auxin degron system is widely used to degrade proteins on demand in animal/human cells by adding auxin to the cell cultures (Nishimura et al. 2009). Further, Arabidopsis research aimed at understanding plant adaptation to changing environments, with the goal of predicting evolutionary trajectories, holds the potential to guide conservation efforts in the face of climate change (Hancock et al. 2011; Assmann 2013; Wilczek et al. 2014; Arana and Picó 2025). However, we must ask the question of whether the features that make Arabidopsis a powerful model (i.e. its compact genome, ease of transformation, small size, and inexpensive growth) remain exclusive to this plant and whether the lessons learned from peculiar features of Arabidopsis can be extrapolated to plants we cultivate or those living in natural ecosystems, either directly or indirectly. Twenty-five years after the publication of the Arabidopsis genome sequence in 2000 (AGI 2000), it is a good time to reflect on the impact of research in Arabidopsis in this focus issue.
Instituto de Biotecnología
Fil: Roeder, Adrienne H. K. Cornell University. Section of Plant Biology and Weill Institute for Cell and Molecular Biology. School of Integrative Plant Science; Estados Unidos
Fil: Argueso, Cristiana T. Colorado State University. Department of Agricultural Biology; Estados Unidos
Fil: Williams, Mary. American Society of Plant Biology; Estados Unidos
Fil: Auge, Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Auge, Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Agrobiotecnología y Biología Molecular (IABIMO); Argentina
Fil: Li, Xin. University of British Columbia. Michael Smith Laboratories; Canadá
Fil: Strader, Lucia. Duke University. Department of Biology; Estados Unidos
Fil: Uauy, Cristobal. Norwich Research Park. John Innes Centre; Reino Unido
Fil: Wu, Shuang. Fujian Agriculture and Forestry University. College of Horticulture. State Key Laboratory of Agricultural and Forestry Biosecurity; China
Fuente
The Plant Cell 37 (5) : koaf119 (May 2025)
Materia
Arabidopsis
Plants
Genes
Plantas
Genes
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
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spelling Focus on translational research from arabidopsis to crop plants and beyondRoeder, Adrienne H.K.Argueso, Cristiana T.Williams, MaryAuge, GabrielaLi, XinStrader, LuciaUauy, CristobalWu, ShuangArabidopsisPlantsGenesPlantasGenesOver the past 4 decades, substantial research efforts in plant science worldwide have focused on the model system Arabidopsis thaliana (Provart et al. 2015). Many of us have dedicated years to the study of Arabidopsis, motivated by the notion that our findings will yield advancements in agriculture and natural ecosystems. Considering translation holistically as the gene functions, pathways, and technologies discovered and developed in Arabidopsis that inform our understanding of other plants, Arabidopsis has had a powerful influence. In particular, the annotation of plant genomes heavily relies on the gene functions elucidated in Arabidopsis (Whitt et al. 2020; Wimalanathan and Lawrence-Dill 2021; Fattel et al. 2022). Many technologies and techniques pioneered in Arabidopsis have been successfully translated to crops and other plant species (Yaschenko et al. 2025). Remarkably, discoveries in Arabidopsis and other plants have also contributed significantly to biomedical research (Jones et al. 2008; Strader et al. 2025). For example, the auxin degron system is widely used to degrade proteins on demand in animal/human cells by adding auxin to the cell cultures (Nishimura et al. 2009). Further, Arabidopsis research aimed at understanding plant adaptation to changing environments, with the goal of predicting evolutionary trajectories, holds the potential to guide conservation efforts in the face of climate change (Hancock et al. 2011; Assmann 2013; Wilczek et al. 2014; Arana and Picó 2025). However, we must ask the question of whether the features that make Arabidopsis a powerful model (i.e. its compact genome, ease of transformation, small size, and inexpensive growth) remain exclusive to this plant and whether the lessons learned from peculiar features of Arabidopsis can be extrapolated to plants we cultivate or those living in natural ecosystems, either directly or indirectly. Twenty-five years after the publication of the Arabidopsis genome sequence in 2000 (AGI 2000), it is a good time to reflect on the impact of research in Arabidopsis in this focus issue.Instituto de BiotecnologíaFil: Roeder, Adrienne H. K. Cornell University. Section of Plant Biology and Weill Institute for Cell and Molecular Biology. School of Integrative Plant Science; Estados UnidosFil: Argueso, Cristiana T. Colorado State University. Department of Agricultural Biology; Estados UnidosFil: Williams, Mary. American Society of Plant Biology; Estados UnidosFil: Auge, Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Auge, Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Agrobiotecnología y Biología Molecular (IABIMO); ArgentinaFil: Li, Xin. University of British Columbia. Michael Smith Laboratories; CanadáFil: Strader, Lucia. Duke University. Department of Biology; Estados UnidosFil: Uauy, Cristobal. Norwich Research Park. John Innes Centre; Reino UnidoFil: Wu, Shuang. Fujian Agriculture and Forestry University. College of Horticulture. State Key Laboratory of Agricultural and Forestry Biosecurity; ChinaOxford University Press2025-06-13T16:42:37Z2025-06-13T16:42:37Z2025-05info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/22691https://academic.oup.com/plcell/article/37/5/koaf119/81331871532-298Xhttps://doi.org/10.1093/plcell/koaf119The Plant Cell 37 (5) : koaf119 (May 2025)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2026-10-01T10:23:48Zoai:localhost:20.500.12123/22691instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2026-10-01 10:23:49.765INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Focus on translational research from arabidopsis to crop plants and beyond
title Focus on translational research from arabidopsis to crop plants and beyond
spellingShingle Focus on translational research from arabidopsis to crop plants and beyond
Roeder, Adrienne H.K.
Arabidopsis
Plants
Genes
Plantas
Genes
title_short Focus on translational research from arabidopsis to crop plants and beyond
title_full Focus on translational research from arabidopsis to crop plants and beyond
title_fullStr Focus on translational research from arabidopsis to crop plants and beyond
title_full_unstemmed Focus on translational research from arabidopsis to crop plants and beyond
title_sort Focus on translational research from arabidopsis to crop plants and beyond
dc.creator.none.fl_str_mv Roeder, Adrienne H.K.
Argueso, Cristiana T.
Williams, Mary
Auge, Gabriela
Li, Xin
Strader, Lucia
Uauy, Cristobal
Wu, Shuang
author Roeder, Adrienne H.K.
author_facet Roeder, Adrienne H.K.
Argueso, Cristiana T.
Williams, Mary
Auge, Gabriela
Li, Xin
Strader, Lucia
Uauy, Cristobal
Wu, Shuang
author_role author
author2 Argueso, Cristiana T.
Williams, Mary
Auge, Gabriela
Li, Xin
Strader, Lucia
Uauy, Cristobal
Wu, Shuang
author2_role author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Arabidopsis
Plants
Genes
Plantas
Genes
topic Arabidopsis
Plants
Genes
Plantas
Genes
dc.description.none.fl_txt_mv Over the past 4 decades, substantial research efforts in plant science worldwide have focused on the model system Arabidopsis thaliana (Provart et al. 2015). Many of us have dedicated years to the study of Arabidopsis, motivated by the notion that our findings will yield advancements in agriculture and natural ecosystems. Considering translation holistically as the gene functions, pathways, and technologies discovered and developed in Arabidopsis that inform our understanding of other plants, Arabidopsis has had a powerful influence. In particular, the annotation of plant genomes heavily relies on the gene functions elucidated in Arabidopsis (Whitt et al. 2020; Wimalanathan and Lawrence-Dill 2021; Fattel et al. 2022). Many technologies and techniques pioneered in Arabidopsis have been successfully translated to crops and other plant species (Yaschenko et al. 2025). Remarkably, discoveries in Arabidopsis and other plants have also contributed significantly to biomedical research (Jones et al. 2008; Strader et al. 2025). For example, the auxin degron system is widely used to degrade proteins on demand in animal/human cells by adding auxin to the cell cultures (Nishimura et al. 2009). Further, Arabidopsis research aimed at understanding plant adaptation to changing environments, with the goal of predicting evolutionary trajectories, holds the potential to guide conservation efforts in the face of climate change (Hancock et al. 2011; Assmann 2013; Wilczek et al. 2014; Arana and Picó 2025). However, we must ask the question of whether the features that make Arabidopsis a powerful model (i.e. its compact genome, ease of transformation, small size, and inexpensive growth) remain exclusive to this plant and whether the lessons learned from peculiar features of Arabidopsis can be extrapolated to plants we cultivate or those living in natural ecosystems, either directly or indirectly. Twenty-five years after the publication of the Arabidopsis genome sequence in 2000 (AGI 2000), it is a good time to reflect on the impact of research in Arabidopsis in this focus issue.
Instituto de Biotecnología
Fil: Roeder, Adrienne H. K. Cornell University. Section of Plant Biology and Weill Institute for Cell and Molecular Biology. School of Integrative Plant Science; Estados Unidos
Fil: Argueso, Cristiana T. Colorado State University. Department of Agricultural Biology; Estados Unidos
Fil: Williams, Mary. American Society of Plant Biology; Estados Unidos
Fil: Auge, Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Auge, Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Agrobiotecnología y Biología Molecular (IABIMO); Argentina
Fil: Li, Xin. University of British Columbia. Michael Smith Laboratories; Canadá
Fil: Strader, Lucia. Duke University. Department of Biology; Estados Unidos
Fil: Uauy, Cristobal. Norwich Research Park. John Innes Centre; Reino Unido
Fil: Wu, Shuang. Fujian Agriculture and Forestry University. College of Horticulture. State Key Laboratory of Agricultural and Forestry Biosecurity; China
description Over the past 4 decades, substantial research efforts in plant science worldwide have focused on the model system Arabidopsis thaliana (Provart et al. 2015). Many of us have dedicated years to the study of Arabidopsis, motivated by the notion that our findings will yield advancements in agriculture and natural ecosystems. Considering translation holistically as the gene functions, pathways, and technologies discovered and developed in Arabidopsis that inform our understanding of other plants, Arabidopsis has had a powerful influence. In particular, the annotation of plant genomes heavily relies on the gene functions elucidated in Arabidopsis (Whitt et al. 2020; Wimalanathan and Lawrence-Dill 2021; Fattel et al. 2022). Many technologies and techniques pioneered in Arabidopsis have been successfully translated to crops and other plant species (Yaschenko et al. 2025). Remarkably, discoveries in Arabidopsis and other plants have also contributed significantly to biomedical research (Jones et al. 2008; Strader et al. 2025). For example, the auxin degron system is widely used to degrade proteins on demand in animal/human cells by adding auxin to the cell cultures (Nishimura et al. 2009). Further, Arabidopsis research aimed at understanding plant adaptation to changing environments, with the goal of predicting evolutionary trajectories, holds the potential to guide conservation efforts in the face of climate change (Hancock et al. 2011; Assmann 2013; Wilczek et al. 2014; Arana and Picó 2025). However, we must ask the question of whether the features that make Arabidopsis a powerful model (i.e. its compact genome, ease of transformation, small size, and inexpensive growth) remain exclusive to this plant and whether the lessons learned from peculiar features of Arabidopsis can be extrapolated to plants we cultivate or those living in natural ecosystems, either directly or indirectly. Twenty-five years after the publication of the Arabidopsis genome sequence in 2000 (AGI 2000), it is a good time to reflect on the impact of research in Arabidopsis in this focus issue.
publishDate 2025
dc.date.none.fl_str_mv 2025-06-13T16:42:37Z
2025-06-13T16:42:37Z
2025-05
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/22691
https://academic.oup.com/plcell/article/37/5/koaf119/8133187
1532-298X
https://doi.org/10.1093/plcell/koaf119
url http://hdl.handle.net/20.500.12123/22691
https://academic.oup.com/plcell/article/37/5/koaf119/8133187
https://doi.org/10.1093/plcell/koaf119
identifier_str_mv 1532-298X
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
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Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Oxford University Press
publisher.none.fl_str_mv Oxford University Press
dc.source.none.fl_str_mv The Plant Cell 37 (5) : koaf119 (May 2025)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
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instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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